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compute_glycolysis_score

hnoca.utils.stress.compute_glycolysis_score(adata, **kwargs)

Compute glycolysis score using hallmark glycolysis genes from MSigDB.

Parameters:

Name Type Description Default
adata AnnData

Anndata object with gene expression data.

required
**kwargs

Additional arguments passed to sc.tl.score_genes.

{}

Returns

`None`. The glycolysis score is stored in `adata.obs["Hallmark_Glycolysis"]`.